Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NcanP55066 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NcanP55066 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NcanP55066 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NcanP55066 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.41■□□□□ 0.54
NcanP55066 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.41■□□□□ 0.54
NcanP55066 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NcanP55066 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NcanP55066 Tgds-204ENSMUST00000228543 1594 ntBASIC18.41■□□□□ 0.54
NcanP55066 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NcanP55066 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NcanP55066 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NcanP55066 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NcanP55066 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NcanP55066 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NcanP55066 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NcanP55066 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NcanP55066 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NcanP55066 Gm6296-201ENSMUST00000222599 943 ntBASIC18.39■□□□□ 0.53
NcanP55066 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NcanP55066 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NcanP55066 Rps4l-201ENSMUST00000071745 943 ntBASIC18.39■□□□□ 0.53
NcanP55066 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NcanP55066 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NcanP55066 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NcanP55066 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NcanP55066 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NcanP55066 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NcanP55066 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.38■□□□□ 0.53
NcanP55066 Gm12644-201ENSMUST00000119935 606 ntBASIC18.38■□□□□ 0.53
NcanP55066 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.38■□□□□ 0.53
NcanP55066 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NcanP55066 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
NcanP55066 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NcanP55066 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NcanP55066 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NcanP55066 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NcanP55066 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NcanP55066 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NcanP55066 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
NcanP55066 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.37■□□□□ 0.53
NcanP55066 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NcanP55066 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.37■□□□□ 0.53
NcanP55066 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.37■□□□□ 0.53
NcanP55066 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NcanP55066 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.37■□□□□ 0.53
NcanP55066 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NcanP55066 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NcanP55066 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NcanP55066 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.37■□□□□ 0.53
NcanP55066 Gm15920-201ENSMUST00000118998 402 ntBASIC18.36■□□□□ 0.53
NcanP55066 Gm15372-201ENSMUST00000120729 834 ntBASIC18.36■□□□□ 0.53
NcanP55066 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NcanP55066 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.36■□□□□ 0.53
NcanP55066 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.36■□□□□ 0.53
NcanP55066 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.36■□□□□ 0.53
NcanP55066 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.36■□□□□ 0.53
NcanP55066 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NcanP55066 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NcanP55066 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NcanP55066 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NcanP55066 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NcanP55066 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NcanP55066 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NcanP55066 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NcanP55066 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
NcanP55066 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.35■□□□□ 0.53
NcanP55066 Gm7862-201ENSMUST00000121461 292 ntBASIC18.35■□□□□ 0.53
NcanP55066 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.35■□□□□ 0.53
NcanP55066 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NcanP55066 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NcanP55066 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.35■□□□□ 0.53
NcanP55066 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NcanP55066 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.35■□□□□ 0.53
NcanP55066 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NcanP55066 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms