Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.73■□□□□ 0.59
Nub1P54729 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.73■□□□□ 0.59
Nub1P54729 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nub1P54729 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.73■□□□□ 0.59
Nub1P54729 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nub1P54729 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.72■□□□□ 0.59
Nub1P54729 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.72■□□□□ 0.59
Nub1P54729 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Mir8112-201ENSMUST00000184382 131 ntBASIC18.72■□□□□ 0.59
Nub1P54729 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.72■□□□□ 0.59
Nub1P54729 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nub1P54729 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.72■□□□□ 0.59
Nub1P54729 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.72■□□□□ 0.59
Nub1P54729 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nub1P54729 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.72■□□□□ 0.59
Nub1P54729 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nub1P54729 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nub1P54729 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Nub1P54729 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nub1P54729 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nub1P54729 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nub1P54729 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nub1P54729 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
Nub1P54729 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.71■□□□□ 0.59
Nub1P54729 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.71■□□□□ 0.59
Nub1P54729 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nub1P54729 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nub1P54729 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nub1P54729 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nub1P54729 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nub1P54729 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nub1P54729 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nub1P54729 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nub1P54729 Mir1199-201ENSMUST00000117015 119 ntBASIC18.7■□□□□ 0.58
Nub1P54729 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.7■□□□□ 0.58
Nub1P54729 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nub1P54729 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nub1P54729 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.7■□□□□ 0.58
Nub1P54729 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nub1P54729 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nub1P54729 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.7■□□□□ 0.58
Nub1P54729 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.69■□□□□ 0.58
Nub1P54729 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nub1P54729 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.69■□□□□ 0.58
Nub1P54729 Gm10517-202ENSMUST00000192970 758 ntBASIC18.69■□□□□ 0.58
Nub1P54729 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.69■□□□□ 0.58
Nub1P54729 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nub1P54729 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nub1P54729 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nub1P54729 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nub1P54729 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nub1P54729 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.68■□□□□ 0.58
Nub1P54729 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nub1P54729 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.68■□□□□ 0.58
Nub1P54729 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.68■□□□□ 0.58
Nub1P54729 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nub1P54729 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.68■□□□□ 0.58
Nub1P54729 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.68■□□□□ 0.58
Nub1P54729 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Nub1P54729 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.68■□□□□ 0.58
Nub1P54729 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.68■□□□□ 0.58
Nub1P54729 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nub1P54729 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nub1P54729 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nub1P54729 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms