Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Gm15372-201ENSMUST00000120729 834 ntBASIC17.8■□□□□ 0.44
Sox1P53783 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.8■□□□□ 0.44
Sox1P53783 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sox1P53783 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sox1P53783 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sox1P53783 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Sox1P53783 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sox1P53783 Gm24513-201ENSMUST00000174964 138 ntBASIC17.79■□□□□ 0.44
Sox1P53783 Gm27397-201ENSMUST00000184997 107 ntBASIC17.79■□□□□ 0.44
Sox1P53783 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.79■□□□□ 0.44
Sox1P53783 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.79■□□□□ 0.44
Sox1P53783 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sox1P53783 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.79■□□□□ 0.44
Sox1P53783 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox1P53783 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sox1P53783 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.78■□□□□ 0.44
Sox1P53783 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.78■□□□□ 0.44
Sox1P53783 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sox1P53783 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sox1P53783 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Sox1P53783 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox1P53783 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sox1P53783 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.77■□□□□ 0.44
Sox1P53783 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sox1P53783 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Sox1P53783 Gm10060-201ENSMUST00000212002 111 ntBASIC17.77■□□□□ 0.44
Sox1P53783 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox1P53783 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Sox1P53783 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Sox1P53783 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox1P53783 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Sox1P53783 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox1P53783 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox1P53783 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Sox1P53783 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox1P53783 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sox1P53783 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.76■□□□□ 0.43
Sox1P53783 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sox1P53783 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.76■□□□□ 0.43
Sox1P53783 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Gm44357-201ENSMUST00000195897 142 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm19658-201ENSMUST00000196231 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44367-201ENSMUST00000196836 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44350-201ENSMUST00000197197 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44390-201ENSMUST00000197533 144 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44313-201ENSMUST00000198018 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44486-201ENSMUST00000198508 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44454-201ENSMUST00000198541 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44314-201ENSMUST00000199263 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44394-201ENSMUST00000199558 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44484-201ENSMUST00000199873 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44466-201ENSMUST00000200264 138 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms