Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lbx1P52955 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lbx1P52955 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Lbx1P52955 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lbx1P52955 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.83■□□□□ 0.28
Lbx1P52955 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.83■□□□□ 0.28
Lbx1P52955 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lbx1P52955 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lbx1P52955 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lbx1P52955 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lbx1P52955 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lbx1P52955 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lbx1P52955 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.83■□□□□ 0.28
Lbx1P52955 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lbx1P52955 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Lbx1P52955 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lbx1P52955 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.82■□□□□ 0.28
Lbx1P52955 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lbx1P52955 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lbx1P52955 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.82■□□□□ 0.28
Lbx1P52955 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.82■□□□□ 0.28
Lbx1P52955 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.82■□□□□ 0.28
Lbx1P52955 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Lbx1P52955 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.82■□□□□ 0.28
Lbx1P52955 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lbx1P52955 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.82■□□□□ 0.28
Lbx1P52955 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lbx1P52955 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lbx1P52955 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lbx1P52955 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.81■□□□□ 0.28
Lbx1P52955 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.81■□□□□ 0.28
Lbx1P52955 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lbx1P52955 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lbx1P52955 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lbx1P52955 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lbx1P52955 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lbx1P52955 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.81■□□□□ 0.28
Lbx1P52955 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.81■□□□□ 0.28
Lbx1P52955 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.81■□□□□ 0.28
Lbx1P52955 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lbx1P52955 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lbx1P52955 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lbx1P52955 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lbx1P52955 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lbx1P52955 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.79■□□□□ 0.28
Lbx1P52955 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.79■□□□□ 0.28
Lbx1P52955 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Lbx1P52955 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.79■□□□□ 0.28
Lbx1P52955 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.79■□□□□ 0.28
Lbx1P52955 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.79■□□□□ 0.28
Lbx1P52955 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.79■□□□□ 0.28
Lbx1P52955 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.79■□□□□ 0.28
Lbx1P52955 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lbx1P52955 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lbx1P52955 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.78■□□□□ 0.28
Lbx1P52955 Gm44872-201ENSMUST00000207864 420 ntBASIC16.78■□□□□ 0.28
Lbx1P52955 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.78■□□□□ 0.28
Lbx1P52955 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lbx1P52955 Actl10-202ENSMUST00000226583 1501 ntBASIC16.78■□□□□ 0.28
Lbx1P52955 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Lbx1P52955 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lbx1P52955 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lbx1P52955 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lbx1P52955 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lbx1P52955 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lbx1P52955 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.77■□□□□ 0.28
Lbx1P52955 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lbx1P52955 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Lbx1P52955 Gm9731-201ENSMUST00000209480 747 ntBASIC16.77■□□□□ 0.28
Lbx1P52955 Il3ra-202ENSMUST00000223589 738 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms