Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pdx1P52946 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.23■□□□□ 0.35
Pdx1P52946 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.23■□□□□ 0.35
Pdx1P52946 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.23■□□□□ 0.35
Pdx1P52946 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.23■□□□□ 0.35
Pdx1P52946 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pdx1P52946 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.23■□□□□ 0.35
Pdx1P52946 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pdx1P52946 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Pdx1P52946 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdx1P52946 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pdx1P52946 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pdx1P52946 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Pdx1P52946 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pdx1P52946 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdx1P52946 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.22■□□□□ 0.35
Pdx1P52946 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.22■□□□□ 0.35
Pdx1P52946 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.22■□□□□ 0.35
Pdx1P52946 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdx1P52946 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pdx1P52946 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pdx1P52946 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdx1P52946 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdx1P52946 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdx1P52946 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdx1P52946 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdx1P52946 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pdx1P52946 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.21■□□□□ 0.35
Pdx1P52946 Gm715-201ENSMUST00000117865 831 ntBASIC17.21■□□□□ 0.35
Pdx1P52946 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.21■□□□□ 0.35
Pdx1P52946 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.21■□□□□ 0.35
Pdx1P52946 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pdx1P52946 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdx1P52946 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pdx1P52946 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pdx1P52946 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pdx1P52946 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.2■□□□□ 0.34
Pdx1P52946 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.2■□□□□ 0.34
Pdx1P52946 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.2■□□□□ 0.34
Pdx1P52946 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.2■□□□□ 0.34
Pdx1P52946 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdx1P52946 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdx1P52946 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Pdx1P52946 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdx1P52946 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdx1P52946 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
Pdx1P52946 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdx1P52946 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdx1P52946 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pdx1P52946 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdx1P52946 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdx1P52946 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Pdx1P52946 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdx1P52946 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdx1P52946 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdx1P52946 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Pdx1P52946 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pdx1P52946 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pdx1P52946 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pdx1P52946 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms