Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.61■□□□□ 0.73
Brca1P48754 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca1P48754 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.61■□□□□ 0.73
Brca1P48754 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Brca1P48754 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brca1P48754 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brca1P48754 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca1P48754 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca1P48754 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brca1P48754 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca1P48754 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Brca1P48754 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Gm2651-201ENSMUST00000203560 838 ntBASIC19.6■□□□□ 0.73
Brca1P48754 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.6■□□□□ 0.73
Brca1P48754 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.6■□□□□ 0.73
Brca1P48754 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Brca1P48754 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.6■□□□□ 0.73
Brca1P48754 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.6■□□□□ 0.73
Brca1P48754 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.6■□□□□ 0.73
Brca1P48754 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Brca1P48754 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca1P48754 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca1P48754 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca1P48754 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Brca1P48754 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca1P48754 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca1P48754 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca1P48754 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca1P48754 Gm12895-201ENSMUST00000122214 226 ntBASIC19.58■□□□□ 0.73
Brca1P48754 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brca1P48754 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Brca1P48754 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.58■□□□□ 0.73
Brca1P48754 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Brca1P48754 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Brca1P48754 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brca1P48754 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.58■□□□□ 0.72
Brca1P48754 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brca1P48754 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Brca1P48754 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brca1P48754 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.58■□□□□ 0.72
Brca1P48754 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brca1P48754 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Brca1P48754 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brca1P48754 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brca1P48754 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.57■□□□□ 0.72
Brca1P48754 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.57■□□□□ 0.72
Brca1P48754 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca1P48754 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Brca1P48754 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Brca1P48754 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.56■□□□□ 0.72
Brca1P48754 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brca1P48754 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brca1P48754 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brca1P48754 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brca1P48754 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brca1P48754 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Brca1P48754 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brca1P48754 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Brca1P48754 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Brca1P48754 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Gm27000-201ENSMUST00000182943 842 ntBASIC19.55■□□□□ 0.72
Brca1P48754 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.55■□□□□ 0.72
Brca1P48754 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.55■□□□□ 0.72
Brca1P48754 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Brca1P48754 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Brca1P48754 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Brca1P48754 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Brca1P48754 Gm11452-201ENSMUST00000122376 690 ntBASIC19.55■□□□□ 0.72
Brca1P48754 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms