Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.96■□□□□ 0.95
Nedd4P46935 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Nedd4P46935 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nedd4P46935 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Nedd4P46935 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd4P46935 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nedd4P46935 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nedd4P46935 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nedd4P46935 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nedd4P46935 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Nedd4P46935 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nedd4P46935 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.95■□□□□ 0.94
Nedd4P46935 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nedd4P46935 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nedd4P46935 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.94■□□□□ 0.94
Nedd4P46935 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.94■□□□□ 0.94
Nedd4P46935 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.94■□□□□ 0.94
Nedd4P46935 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Nedd4P46935 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Nedd4P46935 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nedd4P46935 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd4P46935 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd4P46935 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd4P46935 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.93■□□□□ 0.94
Nedd4P46935 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nedd4P46935 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.93■□□□□ 0.94
Nedd4P46935 Gm1401-201ENSMUST00000122048 772 ntBASIC20.93■□□□□ 0.94
Nedd4P46935 Gm11594-201ENSMUST00000122313 162 ntBASIC20.93■□□□□ 0.94
Nedd4P46935 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd4P46935 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Nedd4P46935 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd4P46935 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd4P46935 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd4P46935 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd4P46935 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd4P46935 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Nedd4P46935 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.92■□□□□ 0.94
Nedd4P46935 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.92■□□□□ 0.94
Nedd4P46935 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.92■□□□□ 0.94
Nedd4P46935 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nedd4P46935 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nedd4P46935 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.92■□□□□ 0.94
Nedd4P46935 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.92■□□□□ 0.94
Nedd4P46935 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd4P46935 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd4P46935 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd4P46935 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.91■□□□□ 0.94
Nedd4P46935 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd4P46935 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd4P46935 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.91■□□□□ 0.94
Nedd4P46935 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd4P46935 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.91■□□□□ 0.94
Nedd4P46935 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Nedd4P46935 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd4P46935 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd4P46935 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Nedd4P46935 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd4P46935 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd4P46935 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd4P46935 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd4P46935 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.9■□□□□ 0.94
Nedd4P46935 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nedd4P46935 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nedd4P46935 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Nedd4P46935 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.9■□□□□ 0.94
Nedd4P46935 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.9■□□□□ 0.94
Nedd4P46935 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nedd4P46935 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd4P46935 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd4P46935 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd4P46935 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd4P46935 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms