Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.39□□□□□ -0.11
Hist1h1aP43275 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Gm5874-201ENSMUST00000096101 508 ntBASIC14.39□□□□□ -0.11
Hist1h1aP43275 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Hist1h1aP43275 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.37□□□□□ -0.11
Hist1h1aP43275 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hist1h1aP43275 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hist1h1aP43275 AV356131-201ENSMUST00000206201 750 ntBASIC14.36□□□□□ -0.11
Hist1h1aP43275 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Hist1h1aP43275 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h1aP43275 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.35□□□□□ -0.11
Hist1h1aP43275 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h1aP43275 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h1aP43275 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h1aP43275 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h1aP43275 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h1aP43275 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h1aP43275 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h1aP43275 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h1aP43275 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms