Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.72■□□□□ 0.59
HttP42859 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HttP42859 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HttP42859 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HttP42859 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
HttP42859 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.72■□□□□ 0.59
HttP42859 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HttP42859 Gm10175-201ENSMUST00000086013 645 ntBASIC18.72■□□□□ 0.59
HttP42859 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HttP42859 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HttP42859 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.71■□□□□ 0.59
HttP42859 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HttP42859 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HttP42859 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.71■□□□□ 0.59
HttP42859 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.71■□□□□ 0.58
HttP42859 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.7■□□□□ 0.58
HttP42859 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.7■□□□□ 0.58
HttP42859 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HttP42859 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.7■□□□□ 0.58
HttP42859 Gm37025-201ENSMUST00000195159 829 ntBASIC18.7■□□□□ 0.58
HttP42859 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.7■□□□□ 0.58
HttP42859 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HttP42859 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HttP42859 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HttP42859 Tgds-204ENSMUST00000228543 1594 ntBASIC18.69■□□□□ 0.58
HttP42859 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HttP42859 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HttP42859 Gm14494-201ENSMUST00000118786 435 ntBASIC18.69■□□□□ 0.58
HttP42859 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.69■□□□□ 0.58
HttP42859 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HttP42859 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HttP42859 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HttP42859 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.68■□□□□ 0.58
HttP42859 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HttP42859 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HttP42859 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.68■□□□□ 0.58
HttP42859 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HttP42859 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HttP42859 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.68■□□□□ 0.58
HttP42859 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.68■□□□□ 0.58
HttP42859 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HttP42859 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HttP42859 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.68■□□□□ 0.58
HttP42859 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Gm8097-201ENSMUST00000117903 829 ntBASIC18.67■□□□□ 0.58
HttP42859 Gm6376-201ENSMUST00000209407 580 ntBASIC18.67■□□□□ 0.58
HttP42859 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Gm6296-201ENSMUST00000222599 943 ntBASIC18.67■□□□□ 0.58
HttP42859 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.67■□□□□ 0.58
HttP42859 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HttP42859 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HttP42859 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
HttP42859 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HttP42859 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HttP42859 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HttP42859 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HttP42859 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HttP42859 Gm24513-201ENSMUST00000174964 138 ntBASIC18.65■□□□□ 0.58
HttP42859 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms