Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Timp3P39876 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Timp3P39876 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Timp3P39876 Gm15565-201ENSMUST00000118890 427 ntBASIC14.26□□□□□ -0.13
Timp3P39876 Gm11643-201ENSMUST00000119578 864 ntBASIC14.26□□□□□ -0.13
Timp3P39876 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Gm37292-201ENSMUST00000192062 758 ntBASIC14.26□□□□□ -0.13
Timp3P39876 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Timp3P39876 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Timp3P39876 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Timp3P39876 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timp3P39876 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.25□□□□□ -0.13
Timp3P39876 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.25□□□□□ -0.13
Timp3P39876 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Timp3P39876 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.25□□□□□ -0.13
Timp3P39876 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.25□□□□□ -0.13
Timp3P39876 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Timp3P39876 Gm21814-202ENSMUST00000203277 873 ntBASIC14.25□□□□□ -0.13
Timp3P39876 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Timp3P39876 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.25□□□□□ -0.13
Timp3P39876 Odf3b-204ENSMUST00000227834 930 ntBASIC14.25□□□□□ -0.13
Timp3P39876 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Timp3P39876 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.25□□□□□ -0.13
Timp3P39876 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.25□□□□□ -0.13
Timp3P39876 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Timp3P39876 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.25□□□□□ -0.13
Timp3P39876 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Timp3P39876 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.24□□□□□ -0.13
Timp3P39876 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Timp3P39876 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Timp3P39876 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Gm5417-201ENSMUST00000079706 384 ntBASIC14.24□□□□□ -0.13
Timp3P39876 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.24□□□□□ -0.13
Timp3P39876 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Timp3P39876 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Timp3P39876 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Timp3P39876 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Timp3P39876 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Timp3P39876 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Timp3P39876 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.23□□□□□ -0.13
Timp3P39876 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.23□□□□□ -0.13
Timp3P39876 Timm23-208ENSMUST00000226683 750 ntBASIC14.23□□□□□ -0.13
Timp3P39876 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.23□□□□□ -0.13
Timp3P39876 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Timp3P39876 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms