Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Fen1P39749 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Fen1P39749 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.54■□□□□ 0.4
Fen1P39749 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Fen1P39749 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.54■□□□□ 0.4
Fen1P39749 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.54■□□□□ 0.4
Fen1P39749 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Fen1P39749 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Fen1P39749 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.54■□□□□ 0.4
Fen1P39749 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Fen1P39749 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.54■□□□□ 0.4
Fen1P39749 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fen1P39749 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Fen1P39749 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.53■□□□□ 0.4
Fen1P39749 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.53■□□□□ 0.4
Fen1P39749 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Fen1P39749 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Fen1P39749 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Fen1P39749 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.53■□□□□ 0.4
Fen1P39749 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fen1P39749 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fen1P39749 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.52■□□□□ 0.4
Fen1P39749 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
Fen1P39749 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fen1P39749 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fen1P39749 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fen1P39749 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.52■□□□□ 0.4
Fen1P39749 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fen1P39749 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Fen1P39749 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fen1P39749 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fen1P39749 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Fen1P39749 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fen1P39749 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fen1P39749 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Fen1P39749 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.52■□□□□ 0.39
Fen1P39749 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fen1P39749 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.51■□□□□ 0.39
Fen1P39749 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Fen1P39749 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Fen1P39749 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Fen1P39749 Nespas-201ENSMUST00000143738 1083 ntBASIC17.51■□□□□ 0.39
Fen1P39749 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Fen1P39749 Gm18671-201ENSMUST00000214826 683 ntBASIC17.51■□□□□ 0.39
Fen1P39749 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Fen1P39749 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fen1P39749 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.51■□□□□ 0.39
Fen1P39749 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Fen1P39749 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.5■□□□□ 0.39
Fen1P39749 Gm6420-201ENSMUST00000193885 723 ntBASIC17.5■□□□□ 0.39
Fen1P39749 Gm42778-201ENSMUST00000199644 553 ntBASIC17.5■□□□□ 0.39
Fen1P39749 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fen1P39749 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms