Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn1aP39689 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn1aP39689 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn1aP39689 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdkn1aP39689 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn1aP39689 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn1aP39689 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn1aP39689 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn1aP39689 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn1aP39689 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cdkn1aP39689 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.39□□□□□ -0.11
Cdkn1aP39689 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdkn1aP39689 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.39□□□□□ -0.11
Cdkn1aP39689 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdkn1aP39689 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdkn1aP39689 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdkn1aP39689 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.38□□□□□ -0.11
Cdkn1aP39689 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdkn1aP39689 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.37□□□□□ -0.11
Cdkn1aP39689 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Gm7638-201ENSMUST00000121348 967 ntBASIC14.37□□□□□ -0.11
Cdkn1aP39689 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Gm18959-201ENSMUST00000208954 655 ntBASIC14.37□□□□□ -0.11
Cdkn1aP39689 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdkn1aP39689 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdkn1aP39689 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms