Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Thbs1P35441 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Thbs1P35441 Gm27275-201ENSMUST00000184318 272 ntBASIC16.1■□□□□ 0.17
Thbs1P35441 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.1■□□□□ 0.17
Thbs1P35441 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Thbs1P35441 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Thbs1P35441 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.09■□□□□ 0.17
Thbs1P35441 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.09■□□□□ 0.17
Thbs1P35441 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.09■□□□□ 0.17
Thbs1P35441 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.09■□□□□ 0.17
Thbs1P35441 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Thbs1P35441 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Thbs1P35441 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Thbs1P35441 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Thbs1P35441 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Thbs1P35441 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Thbs1P35441 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.08■□□□□ 0.17
Thbs1P35441 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Thbs1P35441 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.08■□□□□ 0.17
Thbs1P35441 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Thbs1P35441 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Thbs1P35441 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.08■□□□□ 0.16
Thbs1P35441 Gm18025-201ENSMUST00000221733 862 ntBASIC16.08■□□□□ 0.16
Thbs1P35441 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Thbs1P35441 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Thbs1P35441 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Thbs1P35441 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.08■□□□□ 0.16
Thbs1P35441 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.08■□□□□ 0.16
Thbs1P35441 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Thbs1P35441 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.07■□□□□ 0.16
Thbs1P35441 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.07■□□□□ 0.16
Thbs1P35441 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Thbs1P35441 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Thbs1P35441 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.07■□□□□ 0.16
Thbs1P35441 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Thbs1P35441 Gm18666-201ENSMUST00000190039 958 ntBASIC16.07■□□□□ 0.16
Thbs1P35441 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Thbs1P35441 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Thbs1P35441 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.07■□□□□ 0.16
Thbs1P35441 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Thbs1P35441 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Thbs1P35441 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Thbs1P35441 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Thbs1P35441 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.06■□□□□ 0.16
Thbs1P35441 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Thbs1P35441 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Thbs1P35441 Gm37856-201ENSMUST00000191634 999 ntBASIC16.06■□□□□ 0.16
Thbs1P35441 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Thbs1P35441 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Thbs1P35441 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Thbs1P35441 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms