Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Slc6a1P31648 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Slc6a1P31648 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Slc6a1P31648 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.99□□□□□ -0.01
Slc6a1P31648 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.99□□□□□ -0.01
Slc6a1P31648 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.99□□□□□ -0.01
Slc6a1P31648 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Slc6a1P31648 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Slc6a1P31648 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.98□□□□□ -0.01
Slc6a1P31648 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Slc6a1P31648 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Slc6a1P31648 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Slc6a1P31648 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Slc6a1P31648 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Slc6a1P31648 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Slc6a1P31648 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Slc6a1P31648 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Slc6a1P31648 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Slc6a1P31648 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Slc6a1P31648 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.97□□□□□ -0.01
Slc6a1P31648 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Slc6a1P31648 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.97□□□□□ -0.01
Slc6a1P31648 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.97□□□□□ -0.01
Slc6a1P31648 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.97□□□□□ -0.01
Slc6a1P31648 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Slc6a1P31648 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Slc6a1P31648 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Slc6a1P31648 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Slc6a1P31648 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Slc6a1P31648 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.96□□□□□ -0.01
Slc6a1P31648 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.96□□□□□ -0.01
Slc6a1P31648 AV356131-201ENSMUST00000206201 750 ntBASIC14.96□□□□□ -0.01
Slc6a1P31648 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.96□□□□□ -0.01
Slc6a1P31648 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Slc6a1P31648 Gm10033-202ENSMUST00000211874 928 ntBASIC14.96□□□□□ -0.01
Slc6a1P31648 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a1P31648 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Slc6a1P31648 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Slc6a1P31648 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Slc6a1P31648 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Slc6a1P31648 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Slc6a1P31648 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Slc6a1P31648 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms