Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl5P30882 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ccl5P30882 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl5P30882 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl5P30882 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl5P30882 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18■□□□□ 0.47
Ccl5P30882 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ccl5P30882 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ccl5P30882 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ccl5P30882 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18■□□□□ 0.47
Ccl5P30882 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18■□□□□ 0.47
Ccl5P30882 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18■□□□□ 0.47
Ccl5P30882 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ccl5P30882 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Ccl5P30882 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl5P30882 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl5P30882 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl5P30882 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl5P30882 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl5P30882 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.99■□□□□ 0.47
Ccl5P30882 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl5P30882 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl5P30882 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl5P30882 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.99■□□□□ 0.47
Ccl5P30882 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ccl5P30882 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccl5P30882 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccl5P30882 Gm15467-201ENSMUST00000120582 445 ntBASIC17.98■□□□□ 0.47
Ccl5P30882 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccl5P30882 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccl5P30882 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Ccl5P30882 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ccl5P30882 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccl5P30882 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccl5P30882 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccl5P30882 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccl5P30882 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccl5P30882 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccl5P30882 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Ccl5P30882 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Ccl5P30882 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.97■□□□□ 0.47
Ccl5P30882 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl5P30882 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ccl5P30882 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.96■□□□□ 0.47
Ccl5P30882 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Rprl3-201ENSMUST00000157400 290 ntBASIC17.96■□□□□ 0.47
Ccl5P30882 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccl5P30882 Gm10576-201ENSMUST00000191927 825 ntBASIC17.96■□□□□ 0.47
Ccl5P30882 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ccl5P30882 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ccl5P30882 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.96■□□□□ 0.47
Ccl5P30882 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ccl5P30882 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl5P30882 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Ccl5P30882 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccl5P30882 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccl5P30882 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccl5P30882 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl5P30882 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.95■□□□□ 0.46
Ccl5P30882 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl5P30882 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccl5P30882 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl5P30882 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl5P30882 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ccl5P30882 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl5P30882 Tgds-204ENSMUST00000228543 1594 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms