Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp3P28862 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp3P28862 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp3P28862 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.68■□□□□ 0.58
Mmp3P28862 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp3P28862 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Mmp3P28862 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Mmp3P28862 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Mmp3P28862 Gm7213-201ENSMUST00000215977 950 ntBASIC18.67■□□□□ 0.58
Mmp3P28862 Gm21559-201ENSMUST00000220638 855 ntBASIC18.67■□□□□ 0.58
Mmp3P28862 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp3P28862 Gm8587-201ENSMUST00000076538 843 ntBASIC18.67■□□□□ 0.58
Mmp3P28862 Gm10819-201ENSMUST00000099988 561 ntBASIC18.67■□□□□ 0.58
Mmp3P28862 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp3P28862 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.67■□□□□ 0.58
Mmp3P28862 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp3P28862 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp3P28862 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp3P28862 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp3P28862 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp3P28862 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp3P28862 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Mmp3P28862 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mmp3P28862 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Mmp3P28862 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.66■□□□□ 0.58
Mmp3P28862 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mmp3P28862 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Mmp3P28862 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Mmp3P28862 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mmp3P28862 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp3P28862 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp3P28862 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp3P28862 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp3P28862 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Mmp3P28862 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Mmp3P28862 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.65■□□□□ 0.58
Mmp3P28862 Gm33142-201ENSMUST00000193913 867 ntBASIC18.65■□□□□ 0.58
Mmp3P28862 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.65■□□□□ 0.58
Mmp3P28862 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp3P28862 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp3P28862 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp3P28862 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Mmp3P28862 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp3P28862 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.65■□□□□ 0.58
Mmp3P28862 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.65■□□□□ 0.58
Mmp3P28862 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.58
Mmp3P28862 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Mmp3P28862 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp3P28862 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.64■□□□□ 0.57
Mmp3P28862 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp3P28862 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Mmp3P28862 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.64■□□□□ 0.57
Mmp3P28862 Gm27389-201ENSMUST00000183622 195 ntBASIC18.64■□□□□ 0.57
Mmp3P28862 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp3P28862 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp3P28862 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Mmp3P28862 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp3P28862 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp3P28862 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Mmp3P28862 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp3P28862 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp3P28862 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp3P28862 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Mmp3P28862 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.63■□□□□ 0.57
Mmp3P28862 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.63■□□□□ 0.57
Mmp3P28862 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp3P28862 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mmp3P28862 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mmp3P28862 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Mmp3P28862 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.63■□□□□ 0.57
Mmp3P28862 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp3P28862 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp3P28862 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp3P28862 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp3P28862 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp3P28862 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp3P28862 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.62■□□□□ 0.57
Mmp3P28862 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp3P28862 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp3P28862 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms