Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col2a1P28481 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col2a1P28481 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Col2a1P28481 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Col2a1P28481 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.82■□□□□ 0.76
Col2a1P28481 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col2a1P28481 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Col2a1P28481 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col2a1P28481 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Col2a1P28481 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col2a1P28481 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Col2a1P28481 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col2a1P28481 Gm27357-201ENSMUST00000183754 135 ntBASIC19.8■□□□□ 0.76
Col2a1P28481 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col2a1P28481 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col2a1P28481 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col2a1P28481 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.8■□□□□ 0.76
Col2a1P28481 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col2a1P28481 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Col2a1P28481 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col2a1P28481 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.8■□□□□ 0.76
Col2a1P28481 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col2a1P28481 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col2a1P28481 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Gm27704-201ENSMUST00000185094 107 ntBASIC19.79■□□□□ 0.76
Col2a1P28481 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col2a1P28481 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.79■□□□□ 0.76
Col2a1P28481 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.79■□□□□ 0.76
Col2a1P28481 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.79■□□□□ 0.76
Col2a1P28481 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.79■□□□□ 0.76
Col2a1P28481 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col2a1P28481 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col2a1P28481 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.78■□□□□ 0.76
Col2a1P28481 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col2a1P28481 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Col2a1P28481 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Mir770-201ENSMUST00000103252 94 ntBASIC19.78■□□□□ 0.76
Col2a1P28481 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Col2a1P28481 Gm13186-201ENSMUST00000118031 316 ntBASIC19.78■□□□□ 0.76
Col2a1P28481 Gm9103-201ENSMUST00000119371 405 ntBASIC19.78■□□□□ 0.76
Col2a1P28481 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col2a1P28481 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.77■□□□□ 0.76
Col2a1P28481 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Col2a1P28481 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col2a1P28481 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col2a1P28481 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col2a1P28481 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col2a1P28481 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col2a1P28481 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Col2a1P28481 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.77■□□□□ 0.76
Col2a1P28481 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col2a1P28481 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col2a1P28481 Iqck-206ENSMUST00000208658 2891 ntBASIC19.77■□□□□ 0.75
Col2a1P28481 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Col2a1P28481 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col2a1P28481 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col2a1P28481 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col2a1P28481 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms