Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.2■□□□□ 0.82
Pde6aP27664 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.2■□□□□ 0.82
Pde6aP27664 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Pde6aP27664 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6aP27664 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pde6aP27664 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Gm5417-201ENSMUST00000079706 384 ntBASIC20.19■□□□□ 0.82
Pde6aP27664 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pde6aP27664 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Pde6aP27664 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pde6aP27664 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6aP27664 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pde6aP27664 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pde6aP27664 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pde6aP27664 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6aP27664 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pde6aP27664 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6aP27664 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pde6aP27664 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6aP27664 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6aP27664 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pde6aP27664 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.17■□□□□ 0.82
Pde6aP27664 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6aP27664 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pde6aP27664 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pde6aP27664 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Pde6aP27664 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6aP27664 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6aP27664 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6aP27664 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6aP27664 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6aP27664 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Pde6aP27664 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Pde6aP27664 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pde6aP27664 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.16■□□□□ 0.82
Pde6aP27664 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pde6aP27664 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Pde6aP27664 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pde6aP27664 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6aP27664 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Gm7638-201ENSMUST00000121348 967 ntBASIC20.15■□□□□ 0.82
Pde6aP27664 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.15■□□□□ 0.82
Pde6aP27664 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.15■□□□□ 0.82
Pde6aP27664 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.15■□□□□ 0.82
Pde6aP27664 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pde6aP27664 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.15■□□□□ 0.82
Pde6aP27664 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.15■□□□□ 0.82
Pde6aP27664 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.15■□□□□ 0.82
Pde6aP27664 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.15■□□□□ 0.82
Pde6aP27664 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6aP27664 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pde6aP27664 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pde6aP27664 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pde6aP27664 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pde6aP27664 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.14■□□□□ 0.81
Pde6aP27664 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms