Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Pde6bP23440 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.96■□□□□ 0.63
Pde6bP23440 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Pde6bP23440 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pde6bP23440 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6bP23440 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6bP23440 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6bP23440 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6bP23440 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6bP23440 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.95■□□□□ 0.62
Pde6bP23440 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6bP23440 AA414768-201ENSMUST00000121924 1257 ntBASIC18.95■□□□□ 0.62
Pde6bP23440 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.95■□□□□ 0.62
Pde6bP23440 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.95■□□□□ 0.62
Pde6bP23440 Gm10819-201ENSMUST00000099988 561 ntBASIC18.95■□□□□ 0.62
Pde6bP23440 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6bP23440 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pde6bP23440 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6bP23440 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6bP23440 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pde6bP23440 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pde6bP23440 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.94■□□□□ 0.62
Pde6bP23440 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.94■□□□□ 0.62
Pde6bP23440 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6bP23440 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pde6bP23440 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pde6bP23440 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.93■□□□□ 0.62
Pde6bP23440 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Gm18101-201ENSMUST00000215769 548 ntBASIC18.93■□□□□ 0.62
Pde6bP23440 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.93■□□□□ 0.62
Pde6bP23440 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6bP23440 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.92■□□□□ 0.62
Pde6bP23440 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.92■□□□□ 0.62
Pde6bP23440 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.92■□□□□ 0.62
Pde6bP23440 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pde6bP23440 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pde6bP23440 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6bP23440 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pde6bP23440 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Pde6bP23440 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pde6bP23440 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.91■□□□□ 0.62
Pde6bP23440 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.91■□□□□ 0.62
Pde6bP23440 Gm22697-201ENSMUST00000175194 63 ntBASIC18.91■□□□□ 0.62
Pde6bP23440 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.91■□□□□ 0.62
Pde6bP23440 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Pde6bP23440 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.91■□□□□ 0.62
Pde6bP23440 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Pde6bP23440 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms