Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.11■□□□□ 0.33
Srp54P14576 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.1■□□□□ 0.33
Srp54P14576 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Srp54P14576 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.1■□□□□ 0.33
Srp54P14576 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Srp54P14576 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Srp54P14576 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Srp54P14576 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Fst-202ENSMUST00000223640 2612 ntBASIC17.1■□□□□ 0.33
Srp54P14576 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp54P14576 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
Srp54P14576 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Srp54P14576 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.09■□□□□ 0.33
Srp54P14576 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.09■□□□□ 0.33
Srp54P14576 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp54P14576 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Srp54P14576 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Srp54P14576 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Srp54P14576 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Srp54P14576 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Srp54P14576 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp54P14576 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp54P14576 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp54P14576 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp54P14576 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.08■□□□□ 0.32
Srp54P14576 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.08■□□□□ 0.32
Srp54P14576 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp54P14576 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.08■□□□□ 0.32
Srp54P14576 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.08■□□□□ 0.32
Srp54P14576 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Srp54P14576 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Srp54P14576 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp54P14576 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.08■□□□□ 0.32
Srp54P14576 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Srp54P14576 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Srp54P14576 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Srp54P14576 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.07■□□□□ 0.32
Srp54P14576 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Srp54P14576 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Srp54P14576 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Srp54P14576 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp54P14576 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Srp54P14576 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Srp54P14576 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Gm24841-201ENSMUST00000158676 357 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms