Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.86■□□□□ 0.61
RaraP11416 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RaraP11416 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RaraP11416 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RaraP11416 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Gm12933-201ENSMUST00000120203 872 ntBASIC18.85■□□□□ 0.61
RaraP11416 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Gm5408-201ENSMUST00000197998 747 ntBASIC18.85■□□□□ 0.61
RaraP11416 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.85■□□□□ 0.61
RaraP11416 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RaraP11416 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RaraP11416 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RaraP11416 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RaraP11416 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
RaraP11416 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RaraP11416 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RaraP11416 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.84■□□□□ 0.61
RaraP11416 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.84■□□□□ 0.61
RaraP11416 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RaraP11416 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.84■□□□□ 0.61
RaraP11416 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RaraP11416 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RaraP11416 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.83■□□□□ 0.61
RaraP11416 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RaraP11416 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RaraP11416 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RaraP11416 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RaraP11416 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RaraP11416 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RaraP11416 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RaraP11416 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RaraP11416 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RaraP11416 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.83■□□□□ 0.6
RaraP11416 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RaraP11416 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RaraP11416 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RaraP11416 Dio3-201ENSMUST00000097228 1449 ntBASIC18.83■□□□□ 0.6
RaraP11416 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.82■□□□□ 0.6
RaraP11416 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RaraP11416 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RaraP11416 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RaraP11416 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.82■□□□□ 0.6
RaraP11416 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RaraP11416 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.82■□□□□ 0.6
RaraP11416 Gm2559-201ENSMUST00000201323 363 ntBASIC18.82■□□□□ 0.6
RaraP11416 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RaraP11416 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RaraP11416 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RaraP11416 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RaraP11416 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RaraP11416 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RaraP11416 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.82■□□□□ 0.6
RaraP11416 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RaraP11416 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RaraP11416 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RaraP11416 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RaraP11416 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.81■□□□□ 0.6
RaraP11416 Gm4968-201ENSMUST00000071458 858 ntBASIC18.81■□□□□ 0.6
RaraP11416 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RaraP11416 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RaraP11416 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RaraP11416 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RaraP11416 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RaraP11416 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RaraP11416 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RaraP11416 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RaraP11416 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RaraP11416 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RaraP11416 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms