Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Calm3P0DP28 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Calm3P0DP28 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Calm3P0DP28 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.09■□□□□ 0.81
Calm3P0DP28 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Calm3P0DP28 Gm37025-201ENSMUST00000195159 829 ntBASIC20.09■□□□□ 0.81
Calm3P0DP28 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Gm10252-201ENSMUST00000209541 832 ntBASIC20.09■□□□□ 0.81
Calm3P0DP28 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.09■□□□□ 0.81
Calm3P0DP28 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.09■□□□□ 0.81
Calm3P0DP28 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calm3P0DP28 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Calm3P0DP28 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Calm3P0DP28 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Calm3P0DP28 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.08■□□□□ 0.81
Calm3P0DP28 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.08■□□□□ 0.81
Calm3P0DP28 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Calm3P0DP28 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Calm3P0DP28 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Calm3P0DP28 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Calm3P0DP28 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Calm3P0DP28 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.08■□□□□ 0.8
Calm3P0DP28 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Calm3P0DP28 Rarb-207ENSMUST00000225921 2756 ntBASIC20.08■□□□□ 0.8
Calm3P0DP28 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Calm3P0DP28 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Calm3P0DP28 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.07■□□□□ 0.8
Calm3P0DP28 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.07■□□□□ 0.8
Calm3P0DP28 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Gm37055-201ENSMUST00000191866 133 ntBASIC20.07■□□□□ 0.8
Calm3P0DP28 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.07■□□□□ 0.8
Calm3P0DP28 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.07■□□□□ 0.8
Calm3P0DP28 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Calm3P0DP28 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calm3P0DP28 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.06■□□□□ 0.8
Calm3P0DP28 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.06■□□□□ 0.8
Calm3P0DP28 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.06■□□□□ 0.8
Calm3P0DP28 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Calm3P0DP28 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calm3P0DP28 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Calm3P0DP28 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calm3P0DP28 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calm3P0DP28 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.06■□□□□ 0.8
Calm3P0DP28 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.06■□□□□ 0.8
Calm3P0DP28 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Calm3P0DP28 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.06■□□□□ 0.8
Calm3P0DP28 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calm3P0DP28 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calm3P0DP28 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calm3P0DP28 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Calm3P0DP28 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calm3P0DP28 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calm3P0DP28 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.06■□□□□ 0.8
Calm3P0DP28 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Calm3P0DP28 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Calm3P0DP28 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.05■□□□□ 0.8
Calm3P0DP28 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.05■□□□□ 0.8
Calm3P0DP28 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.05■□□□□ 0.8
Calm3P0DP28 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Calm3P0DP28 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calm3P0DP28 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.04■□□□□ 0.8
Calm3P0DP28 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Calm3P0DP28 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calm3P0DP28 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calm3P0DP28 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms