Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h2P0C090 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Gm22697-201ENSMUST00000175194 63 ntBASIC17.72■□□□□ 0.43
Rc3h2P0C090 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.72■□□□□ 0.43
Rc3h2P0C090 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h2P0C090 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rc3h2P0C090 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Gm13474-201ENSMUST00000122466 815 ntBASIC17.71■□□□□ 0.43
Rc3h2P0C090 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Gm18101-201ENSMUST00000215769 548 ntBASIC17.71■□□□□ 0.43
Rc3h2P0C090 Il3ra-202ENSMUST00000223589 738 ntBASIC17.71■□□□□ 0.43
Rc3h2P0C090 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h2P0C090 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.7■□□□□ 0.42
Rc3h2P0C090 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Gm9731-201ENSMUST00000209480 747 ntBASIC17.7■□□□□ 0.42
Rc3h2P0C090 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h2P0C090 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Gm21362-201ENSMUST00000194272 928 ntBASIC17.69■□□□□ 0.42
Rc3h2P0C090 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h2P0C090 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 AA414768-201ENSMUST00000121924 1257 ntBASIC17.68■□□□□ 0.42
Rc3h2P0C090 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.68■□□□□ 0.42
Rc3h2P0C090 Gm7370-201ENSMUST00000219471 767 ntBASIC17.68■□□□□ 0.42
Rc3h2P0C090 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.68■□□□□ 0.42
Rc3h2P0C090 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h2P0C090 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rc3h2P0C090 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rc3h2P0C090 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms