Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NeflP08551 Gm7292-201ENSMUST00000194706 2527 ntBASIC22.69■■□□□ 1.22
NeflP08551 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
NeflP08551 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
NeflP08551 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.68■■□□□ 1.22
NeflP08551 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC22.68■■□□□ 1.22
NeflP08551 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NeflP08551 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
NeflP08551 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NeflP08551 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NeflP08551 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NeflP08551 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.67■■□□□ 1.22
NeflP08551 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.67■■□□□ 1.22
NeflP08551 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.67■■□□□ 1.22
NeflP08551 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.67■■□□□ 1.22
NeflP08551 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NeflP08551 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NeflP08551 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NeflP08551 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NeflP08551 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC22.66■■□□□ 1.22
NeflP08551 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
NeflP08551 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NeflP08551 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.66■■□□□ 1.22
NeflP08551 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
NeflP08551 Gm7514-201ENSMUST00000209475 934 ntBASIC22.66■■□□□ 1.22
NeflP08551 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
NeflP08551 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NeflP08551 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
NeflP08551 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC22.66■■□□□ 1.22
NeflP08551 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NeflP08551 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NeflP08551 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
NeflP08551 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NeflP08551 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
NeflP08551 Gm45244-201ENSMUST00000211328 2200 ntBASIC22.64■■□□□ 1.21
NeflP08551 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.64■■□□□ 1.21
NeflP08551 Gm10493-201ENSMUST00000097270 612 ntBASIC22.64■■□□□ 1.21
NeflP08551 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.64■■□□□ 1.21
NeflP08551 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
NeflP08551 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NeflP08551 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NeflP08551 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NeflP08551 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NeflP08551 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NeflP08551 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC22.63■■□□□ 1.21
NeflP08551 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.63■■□□□ 1.21
NeflP08551 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NeflP08551 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NeflP08551 Gm5421-201ENSMUST00000181698 2354 ntBASIC22.63■■□□□ 1.21
NeflP08551 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NeflP08551 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NeflP08551 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
NeflP08551 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms