Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ApoeP08226 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ApoeP08226 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.51■□□□□ 0.23
ApoeP08226 Nespas-201ENSMUST00000143738 1083 ntBASIC16.51■□□□□ 0.23
ApoeP08226 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ApoeP08226 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ApoeP08226 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.51■□□□□ 0.23
ApoeP08226 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ApoeP08226 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ApoeP08226 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ApoeP08226 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ApoeP08226 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ApoeP08226 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ApoeP08226 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ApoeP08226 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.5■□□□□ 0.23
ApoeP08226 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ApoeP08226 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ApoeP08226 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ApoeP08226 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ApoeP08226 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.5■□□□□ 0.23
ApoeP08226 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.5■□□□□ 0.23
ApoeP08226 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ApoeP08226 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ApoeP08226 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.5■□□□□ 0.23
ApoeP08226 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
ApoeP08226 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ApoeP08226 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
ApoeP08226 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Gm10418-201ENSMUST00000100943 576 ntBASIC16.49■□□□□ 0.23
ApoeP08226 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ApoeP08226 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ApoeP08226 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.49■□□□□ 0.23
ApoeP08226 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.49■□□□□ 0.23
ApoeP08226 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.49■□□□□ 0.23
ApoeP08226 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.49■□□□□ 0.23
ApoeP08226 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.49■□□□□ 0.23
ApoeP08226 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ApoeP08226 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ApoeP08226 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ApoeP08226 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ApoeP08226 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ApoeP08226 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ApoeP08226 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.47■□□□□ 0.23
ApoeP08226 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ApoeP08226 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ApoeP08226 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.47■□□□□ 0.23
ApoeP08226 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ApoeP08226 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.47■□□□□ 0.23
ApoeP08226 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ApoeP08226 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.47■□□□□ 0.23
ApoeP08226 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ApoeP08226 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
ApoeP08226 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ApoeP08226 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ApoeP08226 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ApoeP08226 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.46■□□□□ 0.23
ApoeP08226 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ApoeP08226 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms