Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PrnpP04925 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PrnpP04925 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PrnpP04925 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PrnpP04925 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PrnpP04925 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.07■□□□□ 0.48
PrnpP04925 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
PrnpP04925 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PrnpP04925 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
PrnpP04925 Idnk-204ENSMUST00000226010 1898 ntBASIC18.07■□□□□ 0.48
PrnpP04925 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.07■□□□□ 0.48
PrnpP04925 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PrnpP04925 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PrnpP04925 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PrnpP04925 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.06■□□□□ 0.48
PrnpP04925 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PrnpP04925 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PrnpP04925 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.06■□□□□ 0.48
PrnpP04925 Gm6623-201ENSMUST00000173570 544 ntBASIC18.06■□□□□ 0.48
PrnpP04925 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.06■□□□□ 0.48
PrnpP04925 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.06■□□□□ 0.48
PrnpP04925 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.06■□□□□ 0.48
PrnpP04925 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.06■□□□□ 0.48
PrnpP04925 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PrnpP04925 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PrnpP04925 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.05■□□□□ 0.48
PrnpP04925 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PrnpP04925 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PrnpP04925 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Mir8112-201ENSMUST00000184382 131 ntBASIC18.05■□□□□ 0.48
PrnpP04925 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PrnpP04925 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PrnpP04925 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PrnpP04925 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.05■□□□□ 0.48
PrnpP04925 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrnpP04925 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.04■□□□□ 0.48
PrnpP04925 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrnpP04925 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrnpP04925 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrnpP04925 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.04■□□□□ 0.48
PrnpP04925 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PrnpP04925 Gm37722-201ENSMUST00000193757 208 ntBASIC18.04■□□□□ 0.48
PrnpP04925 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrnpP04925 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrnpP04925 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrnpP04925 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrnpP04925 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrnpP04925 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PrnpP04925 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PrnpP04925 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PrnpP04925 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PrnpP04925 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PrnpP04925 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PrnpP04925 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PrnpP04925 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PrnpP04925 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PrnpP04925 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PrnpP04925 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PrnpP04925 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PrnpP04925 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PrnpP04925 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.03■□□□□ 0.48
PrnpP04925 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PrnpP04925 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 Fst-202ENSMUST00000223640 2612 ntBASIC18.02■□□□□ 0.48
PrnpP04925 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms