Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.65□□□□□ -0.06
Cd74P04441 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cd74P04441 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cd74P04441 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cd74P04441 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Cd74P04441 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.64□□□□□ -0.07
Cd74P04441 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.64□□□□□ -0.07
Cd74P04441 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cd74P04441 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.64□□□□□ -0.07
Cd74P04441 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cd74P04441 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Cd74P04441 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cd74P04441 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.63□□□□□ -0.07
Cd74P04441 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
Cd74P04441 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cd74P04441 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.63□□□□□ -0.07
Cd74P04441 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.63□□□□□ -0.07
Cd74P04441 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cd74P04441 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.63□□□□□ -0.07
Cd74P04441 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.63□□□□□ -0.07
Cd74P04441 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd74P04441 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.63□□□□□ -0.07
Cd74P04441 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cd74P04441 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.62□□□□□ -0.07
Cd74P04441 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.62□□□□□ -0.07
Cd74P04441 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cd74P04441 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Cd74P04441 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.62□□□□□ -0.07
Cd74P04441 Gm22325-201ENSMUST00000158904 308 ntBASIC14.62□□□□□ -0.07
Cd74P04441 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cd74P04441 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cd74P04441 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cd74P04441 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
Cd74P04441 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.62□□□□□ -0.07
Cd74P04441 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd74P04441 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.61□□□□□ -0.07
Cd74P04441 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cd74P04441 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.61□□□□□ -0.07
Cd74P04441 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.61□□□□□ -0.07
Cd74P04441 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms