Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tp53P02340 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.82■□□□□ 0.6
Tp53P02340 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tp53P02340 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.81■□□□□ 0.6
Tp53P02340 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tp53P02340 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.81■□□□□ 0.6
Tp53P02340 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tp53P02340 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tp53P02340 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tp53P02340 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tp53P02340 Mir6982-201ENSMUST00000184354 68 ntBASIC18.81■□□□□ 0.6
Tp53P02340 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.81■□□□□ 0.6
Tp53P02340 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tp53P02340 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tp53P02340 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tp53P02340 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tp53P02340 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tp53P02340 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Tp53P02340 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tp53P02340 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.8■□□□□ 0.6
Tp53P02340 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.8■□□□□ 0.6
Tp53P02340 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tp53P02340 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.8■□□□□ 0.6
Tp53P02340 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tp53P02340 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tp53P02340 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.79■□□□□ 0.6
Tp53P02340 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tp53P02340 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tp53P02340 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tp53P02340 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.79■□□□□ 0.6
Tp53P02340 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tp53P02340 Mir1199-201ENSMUST00000117015 119 ntBASIC18.79■□□□□ 0.6
Tp53P02340 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tp53P02340 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tp53P02340 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.79■□□□□ 0.6
Tp53P02340 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tp53P02340 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tp53P02340 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.79■□□□□ 0.6
Tp53P02340 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tp53P02340 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tp53P02340 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tp53P02340 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.78■□□□□ 0.6
Tp53P02340 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Tp53P02340 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.78■□□□□ 0.6
Tp53P02340 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tp53P02340 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tp53P02340 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tp53P02340 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tp53P02340 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tp53P02340 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tp53P02340 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tp53P02340 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tp53P02340 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tp53P02340 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.77■□□□□ 0.6
Tp53P02340 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.77■□□□□ 0.6
Tp53P02340 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tp53P02340 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tp53P02340 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tp53P02340 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tp53P02340 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tp53P02340 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tp53P02340 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tp53P02340 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tp53P02340 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms