Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CopeO89079 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CopeO89079 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CopeO89079 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.02■□□□□ 0.47
CopeO89079 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.01■□□□□ 0.47
CopeO89079 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.01■□□□□ 0.47
CopeO89079 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CopeO89079 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CopeO89079 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.01■□□□□ 0.47
CopeO89079 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Gm10418-201ENSMUST00000100943 576 ntBASIC18.01■□□□□ 0.47
CopeO89079 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Mir8112-201ENSMUST00000184382 131 ntBASIC18.01■□□□□ 0.47
CopeO89079 Gm38285-201ENSMUST00000192928 922 ntBASIC18.01■□□□□ 0.47
CopeO89079 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.01■□□□□ 0.47
CopeO89079 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CopeO89079 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.01■□□□□ 0.47
CopeO89079 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CopeO89079 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CopeO89079 Gm15743-202ENSMUST00000182690 1901 ntBASIC18■□□□□ 0.47
CopeO89079 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CopeO89079 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CopeO89079 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CopeO89079 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CopeO89079 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18■□□□□ 0.47
CopeO89079 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CopeO89079 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.99■□□□□ 0.47
CopeO89079 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.99■□□□□ 0.47
CopeO89079 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CopeO89079 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
CopeO89079 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
CopeO89079 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.98■□□□□ 0.47
CopeO89079 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.98■□□□□ 0.47
CopeO89079 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.98■□□□□ 0.47
CopeO89079 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.98■□□□□ 0.47
CopeO89079 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CopeO89079 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopeO89079 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopeO89079 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.97■□□□□ 0.47
CopeO89079 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopeO89079 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CopeO89079 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopeO89079 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CopeO89079 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CopeO89079 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CopeO89079 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.97■□□□□ 0.47
CopeO89079 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.97■□□□□ 0.47
CopeO89079 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.97■□□□□ 0.47
CopeO89079 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CopeO89079 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CopeO89079 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.97■□□□□ 0.47
CopeO89079 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CopeO89079 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CopeO89079 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopeO89079 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopeO89079 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopeO89079 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopeO89079 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CopeO89079 Gm2399-201ENSMUST00000104944 225 ntBASIC17.96■□□□□ 0.47
CopeO89079 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.96■□□□□ 0.47
CopeO89079 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.96■□□□□ 0.47
CopeO89079 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.96■□□□□ 0.47
CopeO89079 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms