Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShdO88834 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ShdO88834 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ShdO88834 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
ShdO88834 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShdO88834 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.79■□□□□ 0.44
ShdO88834 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ShdO88834 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ShdO88834 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ShdO88834 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ShdO88834 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ShdO88834 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ShdO88834 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ShdO88834 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ShdO88834 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ShdO88834 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ShdO88834 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ShdO88834 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.77■□□□□ 0.44
ShdO88834 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ShdO88834 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ShdO88834 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ShdO88834 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ShdO88834 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.77■□□□□ 0.44
ShdO88834 Gm10517-202ENSMUST00000192970 758 ntBASIC17.77■□□□□ 0.44
ShdO88834 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.77■□□□□ 0.44
ShdO88834 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ShdO88834 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ShdO88834 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ShdO88834 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ShdO88834 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ShdO88834 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ShdO88834 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.77■□□□□ 0.43
ShdO88834 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.76■□□□□ 0.43
ShdO88834 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ShdO88834 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ShdO88834 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.76■□□□□ 0.43
ShdO88834 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.76■□□□□ 0.43
ShdO88834 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.76■□□□□ 0.43
ShdO88834 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.76■□□□□ 0.43
ShdO88834 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ShdO88834 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ShdO88834 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ShdO88834 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ShdO88834 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ShdO88834 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ShdO88834 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ShdO88834 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.74■□□□□ 0.43
ShdO88834 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.74■□□□□ 0.43
ShdO88834 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.74■□□□□ 0.43
ShdO88834 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.74■□□□□ 0.43
ShdO88834 Gm4974-201ENSMUST00000209974 875 ntBASIC17.74■□□□□ 0.43
ShdO88834 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ShdO88834 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms