Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.95■□□□□ 0.78
Becn1O88597 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Becn1O88597 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.95■□□□□ 0.78
Becn1O88597 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.95■□□□□ 0.78
Becn1O88597 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Becn1O88597 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Becn1O88597 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Becn1O88597 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.94■□□□□ 0.78
Becn1O88597 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.94■□□□□ 0.78
Becn1O88597 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
Becn1O88597 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.94■□□□□ 0.78
Becn1O88597 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.94■□□□□ 0.78
Becn1O88597 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.94■□□□□ 0.78
Becn1O88597 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Becn1O88597 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Becn1O88597 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Becn1O88597 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Becn1O88597 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.93■□□□□ 0.78
Becn1O88597 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Becn1O88597 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.93■□□□□ 0.78
Becn1O88597 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Becn1O88597 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Becn1O88597 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Becn1O88597 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.92■□□□□ 0.78
Becn1O88597 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.92■□□□□ 0.78
Becn1O88597 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Becn1O88597 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Becn1O88597 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Becn1O88597 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Becn1O88597 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Becn1O88597 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Becn1O88597 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
Becn1O88597 Gm9988-201ENSMUST00000069786 435 ntBASIC19.91■□□□□ 0.78
Becn1O88597 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Becn1O88597 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Becn1O88597 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Becn1O88597 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms