Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.29■□□□□ 0.52
Ttc3O88196 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Gm25016-201ENSMUST00000158399 131 ntBASIC18.29■□□□□ 0.52
Ttc3O88196 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ttc3O88196 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ttc3O88196 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.29■□□□□ 0.52
Ttc3O88196 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ttc3O88196 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ttc3O88196 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.28■□□□□ 0.52
Ttc3O88196 Gm7284-201ENSMUST00000131667 944 ntBASIC18.28■□□□□ 0.52
Ttc3O88196 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Ttc3O88196 Gm7213-201ENSMUST00000215977 950 ntBASIC18.28■□□□□ 0.52
Ttc3O88196 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc3O88196 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.28■□□□□ 0.52
Ttc3O88196 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc3O88196 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc3O88196 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc3O88196 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.27■□□□□ 0.52
Ttc3O88196 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc3O88196 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc3O88196 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc3O88196 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc3O88196 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ttc3O88196 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ttc3O88196 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ttc3O88196 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ttc3O88196 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Ttc3O88196 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ttc3O88196 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc3O88196 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc3O88196 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc3O88196 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ttc3O88196 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc3O88196 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc3O88196 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc3O88196 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.26■□□□□ 0.51
Ttc3O88196 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc3O88196 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ttc3O88196 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc3O88196 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc3O88196 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc3O88196 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc3O88196 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ttc3O88196 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.25■□□□□ 0.51
Ttc3O88196 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.25■□□□□ 0.51
Ttc3O88196 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.25■□□□□ 0.51
Ttc3O88196 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc3O88196 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.24■□□□□ 0.51
Ttc3O88196 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.24■□□□□ 0.51
Ttc3O88196 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.24■□□□□ 0.51
Ttc3O88196 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ttc3O88196 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ttc3O88196 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Ttc3O88196 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ttc3O88196 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms