Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pdlim1O70400 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.19■□□□□ 0.34
Pdlim1O70400 Gm37025-201ENSMUST00000195159 829 ntBASIC17.19■□□□□ 0.34
Pdlim1O70400 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.19■□□□□ 0.34
Pdlim1O70400 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Pdlim1O70400 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.19■□□□□ 0.34
Pdlim1O70400 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.18■□□□□ 0.34
Pdlim1O70400 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pdlim1O70400 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Pdlim1O70400 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Gm12085-201ENSMUST00000119263 940 ntBASIC17.18■□□□□ 0.34
Pdlim1O70400 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.18■□□□□ 0.34
Pdlim1O70400 Gm3375-201ENSMUST00000203929 796 ntBASIC17.18■□□□□ 0.34
Pdlim1O70400 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.18■□□□□ 0.34
Pdlim1O70400 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.18■□□□□ 0.34
Pdlim1O70400 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Pdlim1O70400 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim1O70400 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pdlim1O70400 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.17■□□□□ 0.34
Pdlim1O70400 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pdlim1O70400 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim1O70400 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.16■□□□□ 0.34
Pdlim1O70400 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Pdlim1O70400 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.16■□□□□ 0.34
Pdlim1O70400 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.16■□□□□ 0.34
Pdlim1O70400 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.16■□□□□ 0.34
Pdlim1O70400 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pdlim1O70400 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim1O70400 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim1O70400 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim1O70400 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim1O70400 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.15■□□□□ 0.34
Pdlim1O70400 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim1O70400 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Pdlim1O70400 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pdlim1O70400 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.15■□□□□ 0.34
Pdlim1O70400 Gm10252-201ENSMUST00000209541 832 ntBASIC17.15■□□□□ 0.34
Pdlim1O70400 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim1O70400 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim1O70400 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim1O70400 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pdlim1O70400 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.15■□□□□ 0.34
Pdlim1O70400 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim1O70400 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.15■□□□□ 0.34
Pdlim1O70400 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.14■□□□□ 0.33
Pdlim1O70400 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.14■□□□□ 0.33
Pdlim1O70400 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.14■□□□□ 0.33
Pdlim1O70400 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pdlim1O70400 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.14■□□□□ 0.33
Pdlim1O70400 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim1O70400 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pdlim1O70400 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms