Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.58■□□□□ 0.4
Chrna4O70174 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna4O70174 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna4O70174 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna4O70174 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna4O70174 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Chrna4O70174 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna4O70174 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna4O70174 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna4O70174 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.57■□□□□ 0.4
Chrna4O70174 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chrna4O70174 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.57■□□□□ 0.4
Chrna4O70174 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.57■□□□□ 0.4
Chrna4O70174 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna4O70174 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna4O70174 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.56■□□□□ 0.4
Chrna4O70174 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna4O70174 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna4O70174 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chrna4O70174 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.56■□□□□ 0.4
Chrna4O70174 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna4O70174 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.56■□□□□ 0.4
Chrna4O70174 Gm4974-201ENSMUST00000209974 875 ntBASIC17.56■□□□□ 0.4
Chrna4O70174 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.56■□□□□ 0.4
Chrna4O70174 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna4O70174 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chrna4O70174 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna4O70174 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.56■□□□□ 0.4
Chrna4O70174 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna4O70174 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna4O70174 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna4O70174 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.55■□□□□ 0.4
Chrna4O70174 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chrna4O70174 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.55■□□□□ 0.4
Chrna4O70174 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Chrna4O70174 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Chrna4O70174 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Chrna4O70174 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna4O70174 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Chrna4O70174 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.54■□□□□ 0.4
Chrna4O70174 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chrna4O70174 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Chrna4O70174 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Gm22240-201ENSMUST00000175225 82 ntBASIC17.54■□□□□ 0.4
Chrna4O70174 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.54■□□□□ 0.4
Chrna4O70174 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Chrna4O70174 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna4O70174 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chrna4O70174 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.53■□□□□ 0.4
Chrna4O70174 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.53■□□□□ 0.4
Chrna4O70174 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.53■□□□□ 0.4
Chrna4O70174 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.53■□□□□ 0.4
Chrna4O70174 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chrna4O70174 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chrna4O70174 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.53■□□□□ 0.4
Chrna4O70174 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms