Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top3aO70157 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Top3aO70157 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top3aO70157 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top3aO70157 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top3aO70157 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Idnk-204ENSMUST00000226010 1898 ntBASIC17.53■□□□□ 0.4
Top3aO70157 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.53■□□□□ 0.4
Top3aO70157 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.53■□□□□ 0.4
Top3aO70157 Gm27275-201ENSMUST00000184318 272 ntBASIC17.53■□□□□ 0.4
Top3aO70157 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.53■□□□□ 0.4
Top3aO70157 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Top3aO70157 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top3aO70157 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top3aO70157 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.52■□□□□ 0.4
Top3aO70157 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Top3aO70157 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top3aO70157 Gm11249-201ENSMUST00000117071 859 ntBASIC17.52■□□□□ 0.4
Top3aO70157 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.52■□□□□ 0.4
Top3aO70157 Gm20049-201ENSMUST00000219950 730 ntBASIC17.52■□□□□ 0.4
Top3aO70157 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top3aO70157 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.52■□□□□ 0.39
Top3aO70157 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Top3aO70157 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Top3aO70157 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Top3aO70157 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Top3aO70157 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Top3aO70157 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Top3aO70157 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Top3aO70157 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Top3aO70157 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Top3aO70157 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.51■□□□□ 0.39
Top3aO70157 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.51■□□□□ 0.39
Top3aO70157 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top3aO70157 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.5■□□□□ 0.39
Top3aO70157 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Top3aO70157 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.5■□□□□ 0.39
Top3aO70157 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Top3aO70157 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Top3aO70157 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.5■□□□□ 0.39
Top3aO70157 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Top3aO70157 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Top3aO70157 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top3aO70157 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Top3aO70157 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Top3aO70157 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.49■□□□□ 0.39
Top3aO70157 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.49■□□□□ 0.39
Top3aO70157 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.49■□□□□ 0.39
Top3aO70157 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Top3aO70157 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Top3aO70157 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.48■□□□□ 0.39
Top3aO70157 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Top3aO70157 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Top3aO70157 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms