Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sigmar1O55242 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sigmar1O55242 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sigmar1O55242 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sigmar1O55242 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sigmar1O55242 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sigmar1O55242 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sigmar1O55242 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sigmar1O55242 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sigmar1O55242 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.08□□□□□ -0.47
Sigmar1O55242 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.47
Sigmar1O55242 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sigmar1O55242 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sigmar1O55242 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sigmar1O55242 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sigmar1O55242 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.08□□□□□ -0.48
Sigmar1O55242 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.08□□□□□ -0.48
Sigmar1O55242 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.08□□□□□ -0.48
Sigmar1O55242 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sigmar1O55242 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sigmar1O55242 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sigmar1O55242 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.07□□□□□ -0.48
Sigmar1O55242 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.07□□□□□ -0.48
Sigmar1O55242 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.07□□□□□ -0.48
Sigmar1O55242 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.07□□□□□ -0.48
Sigmar1O55242 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sigmar1O55242 Phf7-203ENSMUST00000226565 1971 ntBASIC12.07□□□□□ -0.48
Sigmar1O55242 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.06□□□□□ -0.48
Sigmar1O55242 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sigmar1O55242 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.06□□□□□ -0.48
Sigmar1O55242 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.06□□□□□ -0.48
Sigmar1O55242 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.06□□□□□ -0.48
Sigmar1O55242 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sigmar1O55242 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Sigmar1O55242 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sigmar1O55242 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sigmar1O55242 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sigmar1O55242 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sigmar1O55242 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sigmar1O55242 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sigmar1O55242 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sigmar1O55242 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms