Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Prom1O54990 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Prom1O54990 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.23■□□□□ 0.67
Prom1O54990 Gm26039-201ENSMUST00000158152 144 ntBASIC19.23■□□□□ 0.67
Prom1O54990 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.23■□□□□ 0.67
Prom1O54990 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.23■□□□□ 0.67
Prom1O54990 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Prom1O54990 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prom1O54990 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Prom1O54990 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.22■□□□□ 0.67
Prom1O54990 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Prom1O54990 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prom1O54990 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prom1O54990 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Prom1O54990 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prom1O54990 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prom1O54990 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prom1O54990 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Prom1O54990 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.21■□□□□ 0.67
Prom1O54990 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Gm17807-201ENSMUST00000186869 298 ntBASIC19.21■□□□□ 0.67
Prom1O54990 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Prom1O54990 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prom1O54990 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prom1O54990 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prom1O54990 Gm11355-201ENSMUST00000121120 306 ntBASIC19.2■□□□□ 0.66
Prom1O54990 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prom1O54990 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.2■□□□□ 0.66
Prom1O54990 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Prom1O54990 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prom1O54990 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prom1O54990 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prom1O54990 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.2■□□□□ 0.66
Prom1O54990 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prom1O54990 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.2■□□□□ 0.66
Prom1O54990 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prom1O54990 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.19■□□□□ 0.66
Prom1O54990 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.19■□□□□ 0.66
Prom1O54990 Gm7461-201ENSMUST00000058918 827 ntBASIC19.19■□□□□ 0.66
Prom1O54990 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prom1O54990 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.18■□□□□ 0.66
Prom1O54990 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.18■□□□□ 0.66
Prom1O54990 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.18■□□□□ 0.66
Prom1O54990 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Prom1O54990 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Prom1O54990 Actl10-202ENSMUST00000226583 1501 ntBASIC19.18■□□□□ 0.66
Prom1O54990 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prom1O54990 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Prom1O54990 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.17■□□□□ 0.66
Prom1O54990 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms