Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.1■□□□□ 0.49
Cldn5O54942 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.1■□□□□ 0.49
Cldn5O54942 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.1■□□□□ 0.49
Cldn5O54942 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cldn5O54942 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cldn5O54942 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cldn5O54942 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn5O54942 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cldn5O54942 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn5O54942 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn5O54942 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn5O54942 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cldn5O54942 Gm7977-201ENSMUST00000193787 748 ntBASIC18.09■□□□□ 0.49
Cldn5O54942 Gm37025-201ENSMUST00000195159 829 ntBASIC18.09■□□□□ 0.49
Cldn5O54942 Gm8969-201ENSMUST00000199694 526 ntBASIC18.09■□□□□ 0.49
Cldn5O54942 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Cldn5O54942 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn5O54942 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cldn5O54942 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn5O54942 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn5O54942 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn5O54942 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn5O54942 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn5O54942 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn5O54942 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn5O54942 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.08■□□□□ 0.48
Cldn5O54942 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.08■□□□□ 0.48
Cldn5O54942 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.08■□□□□ 0.48
Cldn5O54942 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn5O54942 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.08■□□□□ 0.48
Cldn5O54942 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn5O54942 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn5O54942 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn5O54942 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn5O54942 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn5O54942 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn5O54942 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cldn5O54942 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cldn5O54942 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn5O54942 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn5O54942 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn5O54942 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn5O54942 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Cldn5O54942 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn5O54942 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.06■□□□□ 0.48
Cldn5O54942 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn5O54942 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn5O54942 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn5O54942 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cldn5O54942 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.06■□□□□ 0.48
Cldn5O54942 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn5O54942 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn5O54942 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.05■□□□□ 0.48
Cldn5O54942 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cldn5O54942 Gm17661-201ENSMUST00000170317 270 ntBASIC18.05■□□□□ 0.48
Cldn5O54942 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.05■□□□□ 0.48
Cldn5O54942 Gm18959-201ENSMUST00000208954 655 ntBASIC18.05■□□□□ 0.48
Cldn5O54942 Gm9731-201ENSMUST00000209480 747 ntBASIC18.05■□□□□ 0.48
Cldn5O54942 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cldn5O54942 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cldn5O54942 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.05■□□□□ 0.48
Cldn5O54942 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn5O54942 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.05■□□□□ 0.48
Cldn5O54942 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.05■□□□□ 0.48
Cldn5O54942 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms