Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Dkk1O54908 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.23■□□□□ 0.03
Dkk1O54908 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Dkk1O54908 Gm11643-201ENSMUST00000119578 864 ntBASIC15.23■□□□□ 0.03
Dkk1O54908 Gm12001-201ENSMUST00000121727 913 ntBASIC15.23■□□□□ 0.03
Dkk1O54908 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.23■□□□□ 0.03
Dkk1O54908 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.23■□□□□ 0.03
Dkk1O54908 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.23■□□□□ 0.03
Dkk1O54908 AC165260.5-201ENSMUST00000224640 1247 ntBASIC15.23■□□□□ 0.03
Dkk1O54908 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Dkk1O54908 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dkk1O54908 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.22■□□□□ 0.03
Dkk1O54908 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Dkk1O54908 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Dkk1O54908 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dkk1O54908 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.22■□□□□ 0.03
Dkk1O54908 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Dkk1O54908 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dkk1O54908 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC15.22■□□□□ 0.03
Dkk1O54908 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dkk1O54908 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.22■□□□□ 0.03
Dkk1O54908 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.22■□□□□ 0.03
Dkk1O54908 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.22■□□□□ 0.03
Dkk1O54908 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Dkk1O54908 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dkk1O54908 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Dkk1O54908 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.22■□□□□ 0.03
Dkk1O54908 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dkk1O54908 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dkk1O54908 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dkk1O54908 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dkk1O54908 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dkk1O54908 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Gm10418-201ENSMUST00000100943 576 ntBASIC15.21■□□□□ 0.03
Dkk1O54908 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Gm5133-201ENSMUST00000118940 1255 ntBASIC15.21■□□□□ 0.03
Dkk1O54908 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Dkk1O54908 Gm29791-202ENSMUST00000207888 369 ntBASIC15.21■□□□□ 0.03
Dkk1O54908 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Dkk1O54908 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.21■□□□□ 0.03
Dkk1O54908 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.21■□□□□ 0.03
Dkk1O54908 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dkk1O54908 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Dkk1O54908 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Dkk1O54908 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Dkk1O54908 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Dkk1O54908 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.2■□□□□ 0.02
Dkk1O54908 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.2■□□□□ 0.02
Dkk1O54908 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Dkk1O54908 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.2■□□□□ 0.02
Dkk1O54908 Gm15378-201ENSMUST00000121894 207 ntBASIC15.2■□□□□ 0.02
Dkk1O54908 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Gm37292-201ENSMUST00000192062 758 ntBASIC15.2■□□□□ 0.02
Dkk1O54908 Gm42545-201ENSMUST00000202755 922 ntBASIC15.2■□□□□ 0.02
Dkk1O54908 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.2■□□□□ 0.02
Dkk1O54908 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Dkk1O54908 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.2■□□□□ 0.02
Dkk1O54908 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dkk1O54908 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms