Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChkaO54804 Dio3-201ENSMUST00000097228 1449 ntBASIC17.61■□□□□ 0.41
ChkaO54804 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChkaO54804 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChkaO54804 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChkaO54804 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChkaO54804 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChkaO54804 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChkaO54804 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ChkaO54804 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ChkaO54804 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ChkaO54804 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ChkaO54804 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
ChkaO54804 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ChkaO54804 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
ChkaO54804 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ChkaO54804 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.6■□□□□ 0.41
ChkaO54804 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ChkaO54804 Gm29257-201ENSMUST00000186115 639 ntBASIC17.6■□□□□ 0.41
ChkaO54804 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.6■□□□□ 0.41
ChkaO54804 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.6■□□□□ 0.41
ChkaO54804 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ChkaO54804 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ChkaO54804 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.6■□□□□ 0.41
ChkaO54804 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ChkaO54804 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ChkaO54804 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ChkaO54804 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.59■□□□□ 0.41
ChkaO54804 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Gm12896-201ENSMUST00000118430 226 ntBASIC17.59■□□□□ 0.41
ChkaO54804 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Gm10602-201ENSMUST00000098239 609 ntBASIC17.59■□□□□ 0.41
ChkaO54804 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ChkaO54804 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.59■□□□□ 0.41
ChkaO54804 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ChkaO54804 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ChkaO54804 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ChkaO54804 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ChkaO54804 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ChkaO54804 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ChkaO54804 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.58■□□□□ 0.4
ChkaO54804 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.58■□□□□ 0.4
ChkaO54804 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ChkaO54804 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ChkaO54804 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ChkaO54804 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ChkaO54804 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ChkaO54804 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ChkaO54804 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ChkaO54804 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 Gm11249-201ENSMUST00000117071 859 ntBASIC17.57■□□□□ 0.4
ChkaO54804 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.57■□□□□ 0.4
ChkaO54804 Gm10138-203ENSMUST00000206952 366 ntBASIC17.57■□□□□ 0.4
ChkaO54804 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ChkaO54804 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ChkaO54804 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ChkaO54804 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.56■□□□□ 0.4
ChkaO54804 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ChkaO54804 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ChkaO54804 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ChkaO54804 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ChkaO54804 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ChkaO54804 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ChkaO54804 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ChkaO54804 Mir6349-201ENSMUST00000184059 97 ntBASIC17.56■□□□□ 0.4
ChkaO54804 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.56■□□□□ 0.4
ChkaO54804 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.56■□□□□ 0.4
ChkaO54804 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.56■□□□□ 0.4
ChkaO54804 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ChkaO54804 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ChkaO54804 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ChkaO54804 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ChkaO54804 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.56■□□□□ 0.4
ChkaO54804 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ChkaO54804 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ChkaO54804 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.55■□□□□ 0.4
ChkaO54804 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms