Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Limk2O54785 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Limk2O54785 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.69■□□□□ 0.42
Limk2O54785 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Gm30025-201ENSMUST00000218555 728 ntBASIC17.69■□□□□ 0.42
Limk2O54785 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.69■□□□□ 0.42
Limk2O54785 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Limk2O54785 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.68■□□□□ 0.42
Limk2O54785 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Limk2O54785 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Limk2O54785 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Limk2O54785 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.68■□□□□ 0.42
Limk2O54785 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Limk2O54785 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.67■□□□□ 0.42
Limk2O54785 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Limk2O54785 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Limk2O54785 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Limk2O54785 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Limk2O54785 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Limk2O54785 Gm4974-201ENSMUST00000209974 875 ntBASIC17.67■□□□□ 0.42
Limk2O54785 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.67■□□□□ 0.42
Limk2O54785 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Limk2O54785 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Limk2O54785 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Limk2O54785 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Limk2O54785 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Limk2O54785 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.66■□□□□ 0.42
Limk2O54785 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Limk2O54785 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.66■□□□□ 0.42
Limk2O54785 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Limk2O54785 Gm10517-202ENSMUST00000192970 758 ntBASIC17.66■□□□□ 0.42
Limk2O54785 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.66■□□□□ 0.42
Limk2O54785 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.66■□□□□ 0.42
Limk2O54785 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Limk2O54785 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Limk2O54785 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Limk2O54785 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Limk2O54785 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Limk2O54785 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Limk2O54785 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.65■□□□□ 0.42
Limk2O54785 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.65■□□□□ 0.42
Limk2O54785 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.65■□□□□ 0.42
Limk2O54785 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Limk2O54785 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.64■□□□□ 0.42
Limk2O54785 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Limk2O54785 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Limk2O54785 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Limk2O54785 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Limk2O54785 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.64■□□□□ 0.41
Limk2O54785 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.64■□□□□ 0.41
Limk2O54785 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.64■□□□□ 0.41
Limk2O54785 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms