Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.97■□□□□ 0.47
Sdc4O35988 Gm7638-201ENSMUST00000121348 967 ntBASIC17.97■□□□□ 0.47
Sdc4O35988 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.97■□□□□ 0.47
Sdc4O35988 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Sdc4O35988 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc4O35988 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc4O35988 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc4O35988 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc4O35988 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc4O35988 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Sdc4O35988 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sdc4O35988 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc4O35988 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
Sdc4O35988 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.96■□□□□ 0.47
Sdc4O35988 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.96■□□□□ 0.47
Sdc4O35988 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.96■□□□□ 0.47
Sdc4O35988 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sdc4O35988 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc4O35988 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Sdc4O35988 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.95■□□□□ 0.46
Sdc4O35988 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.95■□□□□ 0.46
Sdc4O35988 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.95■□□□□ 0.46
Sdc4O35988 Gm37025-201ENSMUST00000195159 829 ntBASIC17.95■□□□□ 0.46
Sdc4O35988 Gm45058-201ENSMUST00000205810 766 ntBASIC17.95■□□□□ 0.46
Sdc4O35988 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.95■□□□□ 0.46
Sdc4O35988 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc4O35988 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Sdc4O35988 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sdc4O35988 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc4O35988 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sdc4O35988 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Sdc4O35988 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Sdc4O35988 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.93■□□□□ 0.46
Sdc4O35988 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc4O35988 Idnk-204ENSMUST00000226010 1898 ntBASIC17.92■□□□□ 0.46
Sdc4O35988 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sdc4O35988 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sdc4O35988 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.92■□□□□ 0.46
Sdc4O35988 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.92■□□□□ 0.46
Sdc4O35988 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Sdc4O35988 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.92■□□□□ 0.46
Sdc4O35988 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc4O35988 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms