Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.55■□□□□ 0.08
Lsm2O35900 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm2O35900 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm2O35900 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Lsm2O35900 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm2O35900 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.55■□□□□ 0.08
Lsm2O35900 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm2O35900 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.55■□□□□ 0.08
Lsm2O35900 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm2O35900 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm2O35900 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm2O35900 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm2O35900 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm2O35900 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.54■□□□□ 0.08
Lsm2O35900 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.54■□□□□ 0.08
Lsm2O35900 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Lsm2O35900 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm2O35900 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm2O35900 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.54■□□□□ 0.08
Lsm2O35900 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm2O35900 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.54■□□□□ 0.08
Lsm2O35900 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.54■□□□□ 0.08
Lsm2O35900 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.54■□□□□ 0.08
Lsm2O35900 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm2O35900 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm2O35900 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm2O35900 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm2O35900 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm2O35900 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm2O35900 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.53■□□□□ 0.08
Lsm2O35900 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm2O35900 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm2O35900 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm2O35900 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Lsm2O35900 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.53■□□□□ 0.08
Lsm2O35900 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm2O35900 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.53■□□□□ 0.08
Lsm2O35900 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm2O35900 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.53■□□□□ 0.08
Lsm2O35900 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lsm2O35900 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm2O35900 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm2O35900 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.52■□□□□ 0.08
Lsm2O35900 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.52■□□□□ 0.08
Lsm2O35900 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Lsm2O35900 Gm6420-201ENSMUST00000193885 723 ntBASIC15.52■□□□□ 0.08
Lsm2O35900 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Lsm2O35900 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm2O35900 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm2O35900 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm2O35900 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm2O35900 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Lsm2O35900 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm2O35900 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.52■□□□□ 0.07
Lsm2O35900 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Lsm2O35900 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Lsm2O35900 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.51■□□□□ 0.07
Lsm2O35900 Nespas-201ENSMUST00000143738 1083 ntBASIC15.51■□□□□ 0.07
Lsm2O35900 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.51■□□□□ 0.07
Lsm2O35900 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.51■□□□□ 0.07
Lsm2O35900 Gm45417-201ENSMUST00000209533 758 ntBASIC15.51■□□□□ 0.07
Lsm2O35900 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.51■□□□□ 0.07
Lsm2O35900 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Lsm2O35900 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.51■□□□□ 0.07
Lsm2O35900 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm2O35900 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.5■□□□□ 0.07
Lsm2O35900 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm2O35900 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.5■□□□□ 0.07
Lsm2O35900 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm2O35900 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm2O35900 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm2O35900 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.5■□□□□ 0.07
Lsm2O35900 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm2O35900 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Lsm2O35900 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm2O35900 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.5■□□□□ 0.07
Lsm2O35900 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm2O35900 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm2O35900 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Lsm2O35900 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms