Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Phox2bO35690 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Phox2bO35690 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Phox2bO35690 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Phox2bO35690 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Phox2bO35690 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.43■□□□□ 0.38
Phox2bO35690 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phox2bO35690 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.43■□□□□ 0.38
Phox2bO35690 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phox2bO35690 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phox2bO35690 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phox2bO35690 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.43■□□□□ 0.38
Phox2bO35690 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Phox2bO35690 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.43■□□□□ 0.38
Phox2bO35690 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Phox2bO35690 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Phox2bO35690 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Phox2bO35690 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.43■□□□□ 0.38
Phox2bO35690 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Phox2bO35690 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.42■□□□□ 0.38
Phox2bO35690 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Phox2bO35690 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.42■□□□□ 0.38
Phox2bO35690 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Phox2bO35690 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phox2bO35690 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.42■□□□□ 0.38
Phox2bO35690 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.41■□□□□ 0.38
Phox2bO35690 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Phox2bO35690 Gm6623-201ENSMUST00000173570 544 ntBASIC17.41■□□□□ 0.38
Phox2bO35690 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Phox2bO35690 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Phox2bO35690 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.4■□□□□ 0.38
Phox2bO35690 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phox2bO35690 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phox2bO35690 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phox2bO35690 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phox2bO35690 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phox2bO35690 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phox2bO35690 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phox2bO35690 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Phox2bO35690 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.4■□□□□ 0.38
Phox2bO35690 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phox2bO35690 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Phox2bO35690 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Phox2bO35690 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phox2bO35690 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.39■□□□□ 0.37
Phox2bO35690 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phox2bO35690 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Phox2bO35690 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phox2bO35690 Gm13474-201ENSMUST00000122466 815 ntBASIC17.39■□□□□ 0.37
Phox2bO35690 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Phox2bO35690 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phox2bO35690 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.39■□□□□ 0.37
Phox2bO35690 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phox2bO35690 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Phox2bO35690 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Phox2bO35690 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phox2bO35690 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phox2bO35690 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.38■□□□□ 0.37
Phox2bO35690 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Gm43347-201ENSMUST00000200226 580 ntBASIC17.38■□□□□ 0.37
Phox2bO35690 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.38■□□□□ 0.37
Phox2bO35690 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phox2bO35690 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms