Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.74■□□□□ 0.59
Nr1i3O35627 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nr1i3O35627 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.74■□□□□ 0.59
Nr1i3O35627 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nr1i3O35627 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.74■□□□□ 0.59
Nr1i3O35627 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1i3O35627 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nr1i3O35627 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Nr1i3O35627 Gm12896-201ENSMUST00000118430 226 ntBASIC18.74■□□□□ 0.59
Nr1i3O35627 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1i3O35627 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1i3O35627 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nr1i3O35627 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nr1i3O35627 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1i3O35627 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nr1i3O35627 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1i3O35627 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.73■□□□□ 0.59
Nr1i3O35627 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr1i3O35627 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Nr1i3O35627 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr1i3O35627 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nr1i3O35627 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr1i3O35627 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nr1i3O35627 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nr1i3O35627 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr1i3O35627 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr1i3O35627 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr1i3O35627 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr1i3O35627 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr1i3O35627 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nr1i3O35627 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.72■□□□□ 0.59
Nr1i3O35627 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nr1i3O35627 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Nr1i3O35627 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nr1i3O35627 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Nr1i3O35627 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.72■□□□□ 0.59
Nr1i3O35627 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.72■□□□□ 0.59
Nr1i3O35627 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.72■□□□□ 0.59
Nr1i3O35627 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.72■□□□□ 0.59
Nr1i3O35627 Gm10602-201ENSMUST00000098239 609 ntBASIC18.72■□□□□ 0.59
Nr1i3O35627 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr1i3O35627 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr1i3O35627 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr1i3O35627 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nr1i3O35627 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr1i3O35627 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Nr1i3O35627 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.72■□□□□ 0.59
Nr1i3O35627 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.71■□□□□ 0.59
Nr1i3O35627 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nr1i3O35627 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nr1i3O35627 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr1i3O35627 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nr1i3O35627 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.71■□□□□ 0.59
Nr1i3O35627 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr1i3O35627 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.71■□□□□ 0.59
Nr1i3O35627 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.71■□□□□ 0.59
Nr1i3O35627 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Nr1i3O35627 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr1i3O35627 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr1i3O35627 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Nr1i3O35627 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nr1i3O35627 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr1i3O35627 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr1i3O35627 Gm13158-201ENSMUST00000122007 736 ntBASIC18.7■□□□□ 0.58
Nr1i3O35627 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr1i3O35627 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr1i3O35627 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.7■□□□□ 0.58
Nr1i3O35627 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr1i3O35627 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nr1i3O35627 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nr1i3O35627 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr1i3O35627 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr1i3O35627 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr1i3O35627 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.69■□□□□ 0.58
Nr1i3O35627 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nr1i3O35627 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Nr1i3O35627 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1i3O35627 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1i3O35627 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.69■□□□□ 0.58
Nr1i3O35627 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1i3O35627 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.69■□□□□ 0.58
Nr1i3O35627 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nr1i3O35627 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.69■□□□□ 0.58
Nr1i3O35627 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nr1i3O35627 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1i3O35627 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1i3O35627 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1i3O35627 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Nr1i3O35627 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1i3O35627 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.68■□□□□ 0.58
Nr1i3O35627 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nr1i3O35627 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.68■□□□□ 0.58
Nr1i3O35627 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Nr1i3O35627 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms