Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn6O35454 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn6O35454 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn6O35454 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Clcn6O35454 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Clcn6O35454 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.51■□□□□ 0.55
Clcn6O35454 Gm5970-201ENSMUST00000131638 1216 ntBASIC18.51■□□□□ 0.55
Clcn6O35454 Nespas-201ENSMUST00000143738 1083 ntBASIC18.51■□□□□ 0.55
Clcn6O35454 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Gm6420-201ENSMUST00000193885 723 ntBASIC18.51■□□□□ 0.55
Clcn6O35454 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC18.51■□□□□ 0.55
Clcn6O35454 Gm7514-201ENSMUST00000209475 934 ntBASIC18.51■□□□□ 0.55
Clcn6O35454 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Gm272-201ENSMUST00000222073 919 ntBASIC18.51■□□□□ 0.55
Clcn6O35454 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn6O35454 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Clcn6O35454 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.5■□□□□ 0.55
Clcn6O35454 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.5■□□□□ 0.55
Clcn6O35454 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.5■□□□□ 0.55
Clcn6O35454 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Clcn6O35454 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.5■□□□□ 0.55
Clcn6O35454 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.5■□□□□ 0.55
Clcn6O35454 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn6O35454 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn6O35454 Gm28359-201ENSMUST00000187470 1322 ntBASIC18.49■□□□□ 0.55
Clcn6O35454 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Clcn6O35454 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Gm42516-201ENSMUST00000198691 767 ntBASIC18.48■□□□□ 0.55
Clcn6O35454 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.48■□□□□ 0.55
Clcn6O35454 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.48■□□□□ 0.55
Clcn6O35454 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Clcn6O35454 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn6O35454 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Clcn6O35454 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn6O35454 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Clcn6O35454 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn6O35454 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn6O35454 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.47■□□□□ 0.55
Clcn6O35454 Gm3344-201ENSMUST00000169610 603 ntBASIC18.47■□□□□ 0.55
Clcn6O35454 Gm8969-201ENSMUST00000199694 526 ntBASIC18.47■□□□□ 0.55
Clcn6O35454 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms