Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col15a1O35206 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col15a1O35206 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.4■■□□□ 1.18
Col15a1O35206 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col15a1O35206 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Col15a1O35206 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Col15a1O35206 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC22.4■■□□□ 1.18
Col15a1O35206 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Col15a1O35206 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col15a1O35206 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col15a1O35206 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col15a1O35206 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col15a1O35206 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC22.39■■□□□ 1.18
Col15a1O35206 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC22.39■■□□□ 1.18
Col15a1O35206 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC22.39■■□□□ 1.18
Col15a1O35206 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col15a1O35206 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col15a1O35206 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC22.39■■□□□ 1.17
Col15a1O35206 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC22.38■■□□□ 1.17
Col15a1O35206 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Col15a1O35206 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC22.38■■□□□ 1.17
Col15a1O35206 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Col15a1O35206 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Col15a1O35206 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Col15a1O35206 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Col15a1O35206 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC22.38■■□□□ 1.17
Col15a1O35206 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col15a1O35206 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.37■■□□□ 1.17
Col15a1O35206 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col15a1O35206 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col15a1O35206 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC22.37■■□□□ 1.17
Col15a1O35206 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col15a1O35206 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col15a1O35206 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col15a1O35206 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col15a1O35206 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col15a1O35206 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col15a1O35206 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC22.37■■□□□ 1.17
Col15a1O35206 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col15a1O35206 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Col15a1O35206 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col15a1O35206 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col15a1O35206 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC22.36■■□□□ 1.17
Col15a1O35206 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Col15a1O35206 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC22.36■■□□□ 1.17
Col15a1O35206 Ighv6-1-201ENSMUST00000193612 343 ntBASIC22.36■■□□□ 1.17
Col15a1O35206 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC22.36■■□□□ 1.17
Col15a1O35206 AC122351.1-201ENSMUST00000220467 126 ntBASIC22.36■■□□□ 1.17
Col15a1O35206 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col15a1O35206 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col15a1O35206 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Col15a1O35206 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col15a1O35206 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col15a1O35206 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Col15a1O35206 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col15a1O35206 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Col15a1O35206 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
Col15a1O35206 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC22.35■■□□□ 1.17
Col15a1O35206 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC22.35■■□□□ 1.17
Col15a1O35206 Birc2-201ENSMUST00000054878 378 ntBASIC22.35■■□□□ 1.17
Col15a1O35206 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Col15a1O35206 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col15a1O35206 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col15a1O35206 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col15a1O35206 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col15a1O35206 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col15a1O35206 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col15a1O35206 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Col15a1O35206 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col15a1O35206 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col15a1O35206 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col15a1O35206 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Col15a1O35206 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC22.33■■□□□ 1.17
Col15a1O35206 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC22.33■■□□□ 1.17
Col15a1O35206 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Col15a1O35206 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Col15a1O35206 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Col15a1O35206 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Col15a1O35206 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Col15a1O35206 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.32■■□□□ 1.16
Col15a1O35206 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms