Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Gm13401-201ENSMUST00000117074 291 ntBASIC16.35■□□□□ 0.21
Cx3cl1O35188 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.35■□□□□ 0.21
Cx3cl1O35188 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.35■□□□□ 0.21
Cx3cl1O35188 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cl1O35188 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cx3cl1O35188 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.34■□□□□ 0.21
Cx3cl1O35188 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Gm715-201ENSMUST00000117865 831 ntBASIC16.34■□□□□ 0.21
Cx3cl1O35188 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.34■□□□□ 0.21
Cx3cl1O35188 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cl1O35188 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cl1O35188 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cl1O35188 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.33■□□□□ 0.21
Cx3cl1O35188 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cl1O35188 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cl1O35188 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cl1O35188 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cl1O35188 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cl1O35188 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Gm10517-202ENSMUST00000192970 758 ntBASIC16.31■□□□□ 0.2
Cx3cl1O35188 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Gm10252-201ENSMUST00000209541 832 ntBASIC16.31■□□□□ 0.2
Cx3cl1O35188 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cx3cl1O35188 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cl1O35188 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms