Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alx4O35137 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx4O35137 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx4O35137 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx4O35137 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx4O35137 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx4O35137 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.54■□□□□ 0.08
Alx4O35137 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx4O35137 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx4O35137 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Alx4O35137 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.54■□□□□ 0.08
Alx4O35137 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.54■□□□□ 0.08
Alx4O35137 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx4O35137 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx4O35137 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx4O35137 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alx4O35137 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Alx4O35137 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx4O35137 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
Alx4O35137 Mir2861-201ENSMUST00000175539 82 ntBASIC15.53■□□□□ 0.08
Alx4O35137 Gm7291-201ENSMUST00000199147 382 ntBASIC15.53■□□□□ 0.08
Alx4O35137 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.53■□□□□ 0.08
Alx4O35137 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.53■□□□□ 0.08
Alx4O35137 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.53■□□□□ 0.08
Alx4O35137 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.53■□□□□ 0.08
Alx4O35137 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.53■□□□□ 0.08
Alx4O35137 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Alx4O35137 Gm6365-201ENSMUST00000054711 744 ntBASIC15.53■□□□□ 0.08
Alx4O35137 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx4O35137 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Alx4O35137 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.53■□□□□ 0.08
Alx4O35137 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.53■□□□□ 0.08
Alx4O35137 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.53■□□□□ 0.08
Alx4O35137 Flg-201ENSMUST00000050758 1488 ntBASIC15.52■□□□□ 0.08
Alx4O35137 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Alx4O35137 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.52■□□□□ 0.08
Alx4O35137 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Alx4O35137 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.52■□□□□ 0.08
Alx4O35137 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.52■□□□□ 0.08
Alx4O35137 Gm18671-201ENSMUST00000214826 683 ntBASIC15.52■□□□□ 0.08
Alx4O35137 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Alx4O35137 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Alx4O35137 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Alx4O35137 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Alx4O35137 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx4O35137 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Alx4O35137 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx4O35137 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Alx4O35137 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Alx4O35137 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Alx4O35137 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Gm7290-201ENSMUST00000104990 617 ntBASIC15.51■□□□□ 0.07
Alx4O35137 Gm12918-201ENSMUST00000120234 636 ntBASIC15.51■□□□□ 0.07
Alx4O35137 Gm15710-201ENSMUST00000121821 636 ntBASIC15.51■□□□□ 0.07
Alx4O35137 Gm5075-201ENSMUST00000196916 622 ntBASIC15.51■□□□□ 0.07
Alx4O35137 Gm44549-201ENSMUST00000208351 577 ntBASIC15.51■□□□□ 0.07
Alx4O35137 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.51■□□□□ 0.07
Alx4O35137 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.51■□□□□ 0.07
Alx4O35137 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.51■□□□□ 0.07
Alx4O35137 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Alx4O35137 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx4O35137 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Alx4O35137 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alx4O35137 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Alx4O35137 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Alx4O35137 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alx4O35137 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alx4O35137 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alx4O35137 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alx4O35137 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Alx4O35137 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alx4O35137 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alx4O35137 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alx4O35137 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alx4O35137 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Alx4O35137 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alx4O35137 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alx4O35137 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alx4O35137 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alx4O35137 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.49■□□□□ 0.07
Alx4O35137 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms