Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hdac1O09106 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.75■□□□□ 0.91
Hdac1O09106 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 Gm11643-201ENSMUST00000119578 864 ntBASIC20.75■□□□□ 0.91
Hdac1O09106 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.75■□□□□ 0.91
Hdac1O09106 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hdac1O09106 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.75■□□□□ 0.91
Hdac1O09106 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hdac1O09106 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac1O09106 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac1O09106 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac1O09106 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.74■□□□□ 0.91
Hdac1O09106 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac1O09106 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac1O09106 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac1O09106 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Hdac1O09106 Rab3c-203ENSMUST00000224180 967 ntBASIC20.74■□□□□ 0.91
Hdac1O09106 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hdac1O09106 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Hdac1O09106 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.74■□□□□ 0.91
Hdac1O09106 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac1O09106 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Hdac1O09106 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac1O09106 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Hdac1O09106 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.73■□□□□ 0.91
Hdac1O09106 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hdac1O09106 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.73■□□□□ 0.91
Hdac1O09106 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac1O09106 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hdac1O09106 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hdac1O09106 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Hdac1O09106 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Hdac1O09106 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.72■□□□□ 0.91
Hdac1O09106 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hdac1O09106 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.72■□□□□ 0.91
Hdac1O09106 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac1O09106 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Hdac1O09106 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hdac1O09106 Mir6349-201ENSMUST00000184059 97 ntBASIC20.71■□□□□ 0.91
Hdac1O09106 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.71■□□□□ 0.91
Hdac1O09106 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hdac1O09106 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac1O09106 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hdac1O09106 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hdac1O09106 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.7■□□□□ 0.9
Hdac1O09106 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac1O09106 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac1O09106 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.7■□□□□ 0.9
Hdac1O09106 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac1O09106 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac1O09106 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.7■□□□□ 0.9
Hdac1O09106 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac1O09106 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms